March 2, 2017 by mamac
How is this software different from similar tools?
Statistical tools exist that can be used to determine if features are differentially expressed between populations (i.e. z-score, K-S test) or to cluster data points into discrete populations (i.e. k-means clustering, SPADE, Citrus). However, no tool exists to quantify the extent to which each feature is most uniquely expressed, or specifically enriched, on each population.
Who developed this software?
Kirsten E. Diggins and Jonathan M. Irish at Vanderbilt University.
Is there a peer reviewed publication describing the software?
Yes.
Diggins KE, Greenplate AR, Leelatian N, Wogsland CE, Irish JM. Characterizing cell subsets using marker enrichment modeling. Nat Methods. 2017 Mar;14(3):275-278.
https://www.ncbi.nlm.nih.gov/pubmed/28135256
How does this Software work?
Details are available in the peer-reviewed publication listed above
What software needs to be installed for it to work properly?
R and R package dependencies
What computer platforms/OS are compatible with this Software?
Windows/MacOS/UNIX (any platform that runs R)
What files are provided through this license upon completion of purchase?
Download includes R package (source code, associated metadata, and vignette) and a sample R script for installing and running MEM.
I have completed the order. What happens next? Where do I download the Software?
Since this is an academic license, the next step will be verification and approval of the license request.
This Software is provided to the licensee in electronic downloadable format. You have instantaneous access to all contents upon approval of your order. Download instructions will be sent to your email.
Once, the order is approved, files will be available in the “My premium content” section (always accessible from the left-hand navigation menu) of VU e-Innovations.com
I am unable to find the download instructions sent via email. Is there an alternative?
It is possible that the automatic download instructions may have gone to your spam folder in your email.
If you are unable to find the order approval email which contains the download link, please use the direct link to VU e-Innovations Premium content that can be accessed from the following URL: http://vueinnovations.com/premium. Once logged into the premium content, digital files are available for download. (You will need to log in with your VU e-Innovations username and password to access the content contained in this link).
If you forgot your password, please use this link to reset it. https://vueinnovations.com/user/password
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